Human Coronavirus Infections in Israel: Epidemiology, Clinical Symptoms and Summer Seasonality of HCoV-HKU1
Identifieur interne : 000952 ( Main/Exploration ); précédent : 000951; suivant : 000953Human Coronavirus Infections in Israel: Epidemiology, Clinical Symptoms and Summer Seasonality of HCoV-HKU1
Auteurs : Nehemya Friedman [Israël] ; Hadar Alter ; Musa Hindiyeh [Israël] ; Ella Mendelson [Israël] ; Yonat Shemer Avni ; Michal Mandelboim [Israël]Source :
- Viruses [ 1999-4915 ] ; 2018.
Descripteurs français
- KwdFr :
- Adolescent, Adulte, Adulte d'âge moyen, Coronavirus (génétique), Coronavirus (isolement et purification), Enfant, Enfant d'âge préscolaire, Enquêtes et questionnaires, Génome viral, Humains, Infections à coronavirus (diagnostic), Infections à coronavirus (épidémiologie), Israël (épidémiologie), Loi du khi-deux, Nourrisson, Prévalence, Saisons, Sujet âgé, Virus respiratoires syncytiaux (génétique), Virus respiratoires syncytiaux (isolement et purification).
- MESH :
- diagnostic : Infections à coronavirus.
- génétique : Coronavirus, Virus respiratoires syncytiaux.
- isolement et purification : Coronavirus, Virus respiratoires syncytiaux.
- épidémiologie : Infections à coronavirus, Israël.
- Adolescent, Adulte, Adulte d'âge moyen, Enfant, Enfant d'âge préscolaire, Enquêtes et questionnaires, Génome viral, Humains, Loi du khi-deux, Nourrisson, Prévalence, Saisons, Sujet âgé.
- Wicri :
- geographic : Israël.
English descriptors
- KwdEn :
- Adolescent, Adult, Aged, Chi-Square Distribution, Child, Child, Preschool, Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus Infections (diagnosis), Coronavirus Infections (epidemiology), Genome, Viral, Humans, Infant, Israel (epidemiology), Middle Aged, Prevalence, Respiratory Syncytial Viruses (genetics), Respiratory Syncytial Viruses (isolation & purification), Seasons, Surveys and Questionnaires.
- MESH :
- geographic , epidemiology : Israel.
- diagnosis : Coronavirus Infections.
- epidemiology : Coronavirus Infections.
- genetics : Coronavirus, Respiratory Syncytial Viruses.
- isolation & purification : Coronavirus, Respiratory Syncytial Viruses.
- Adolescent, Adult, Aged, Chi-Square Distribution, Child, Child, Preschool, Genome, Viral, Humans, Infant, Middle Aged, Prevalence, Seasons, Surveys and Questionnaires.
Abstract
Human coronaviruses (HCoVs) cause mild to severe respiratory diseases. Six types of HCoVs have been discovered, the most recent one termed the Middle East respiratory syndrome coronavirus (MERS-CoV). The aim of this study is to monitor the circulation of HCoV types in the population during 2015–2016 in Israel. HCoVs were detected by real-time PCR analysis in 1910 respiratory samples, collected from influenza-like illness (ILI) patients during the winter sentinel influenza survey across Israel. Moreover, 195 HCoV-positive samples from hospitalized patients were detected during one year at Soroka University Medical Center. While no MERS-CoV infections were detected, 10.36% of patients in the survey were infected with HCoV-OC43 (43.43%), HCoV-NL63 (44.95%), and HCoV-229E (11.62%) viruses. The HCoVs were shown to co-circulate with respiratory syncytial virus (RSV) and to appear prior to influenza virus infections. HCoV clinical symptoms were more severe than those of RSV infections but milder than influenza symptoms. Hospitalized patients had similar HCoV types percentages. However, while it was absent from the public winter survey, 22.6% of the patients were HCoV-HKU1 positives, mainly during the spring-summer period.
Url:
DOI: 10.3390/v10100515
PubMed: 30241410
PubMed Central: 6213580
Affiliations:
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69978</wicri:noRegion></affiliation></author><author><name sortKey="Shemer Avni, Yonat" sort="Shemer Avni, Yonat" uniqKey="Shemer Avni Y" first="Yonat" last="Shemer Avni">Yonat Shemer Avni</name><affiliation><nlm:aff id="af3-viruses-10-00515">Department of Microbiology, Immunology and Genetics, and the Clinical Virology Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, P.O.B. 653, Beer Sheva 84105, Israel;<email>yonat@bgu.ac.il</email></nlm:aff></affiliation></author><author><name sortKey="Mandelboim, Michal" sort="Mandelboim, Michal" uniqKey="Mandelboim M" first="Michal" last="Mandelboim">Michal Mandelboim</name><affiliation><nlm:aff id="af1-viruses-10-00515">Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel-Hashomer, P.O.B. 5265601, Ramat-Gan 5290002, Israel;<email>Nehemya.Friedman@sheba.health.gov.il</email> (N.F.);<email>hadaralter1@gmail.com</email> (H.A.);<email>hindiyeh@yahoo.com</email> 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id="af2-viruses-10-00515">Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978, Israel</nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea>Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978</wicri:regionArea><wicri:noRegion>Tel-Aviv 69978</wicri:noRegion></affiliation></author><author><name sortKey="Alter, Hadar" sort="Alter, Hadar" uniqKey="Alter H" first="Hadar" last="Alter">Hadar Alter</name><affiliation><nlm:aff id="af1-viruses-10-00515">Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel-Hashomer, P.O.B. 5265601, Ramat-Gan 5290002, Israel;<email>Nehemya.Friedman@sheba.health.gov.il</email> (N.F.);<email>hadaralter1@gmail.com</email> (H.A.);<email>hindiyeh@yahoo.com</email> (M.H.);<email>Ella.Mendelson@sheba.health.gov.il</email> (E.M.)</nlm:aff></affiliation></author><author><name sortKey="Hindiyeh, Musa" sort="Hindiyeh, Musa" uniqKey="Hindiyeh M" first="Musa" last="Hindiyeh">Musa Hindiyeh</name><affiliation><nlm:aff id="af1-viruses-10-00515">Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel-Hashomer, P.O.B. 5265601, Ramat-Gan 5290002, Israel;<email>Nehemya.Friedman@sheba.health.gov.il</email> (N.F.);<email>hadaralter1@gmail.com</email> (H.A.);<email>hindiyeh@yahoo.com</email> (M.H.);<email>Ella.Mendelson@sheba.health.gov.il</email> (E.M.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-viruses-10-00515">Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978, Israel</nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea>Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978</wicri:regionArea><wicri:noRegion>Tel-Aviv 69978</wicri:noRegion></affiliation></author><author><name sortKey="Mendelson, Ella" sort="Mendelson, Ella" uniqKey="Mendelson E" first="Ella" last="Mendelson">Ella Mendelson</name><affiliation><nlm:aff id="af1-viruses-10-00515">Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel-Hashomer, P.O.B. 5265601, Ramat-Gan 5290002, Israel;<email>Nehemya.Friedman@sheba.health.gov.il</email> (N.F.);<email>hadaralter1@gmail.com</email> (H.A.);<email>hindiyeh@yahoo.com</email> (M.H.);<email>Ella.Mendelson@sheba.health.gov.il</email> (E.M.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-viruses-10-00515">Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978, Israel</nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea>Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978</wicri:regionArea><wicri:noRegion>Tel-Aviv 69978</wicri:noRegion></affiliation></author><author><name sortKey="Shemer Avni, Yonat" sort="Shemer Avni, Yonat" uniqKey="Shemer Avni Y" first="Yonat" last="Shemer Avni">Yonat Shemer Avni</name><affiliation><nlm:aff id="af3-viruses-10-00515">Department of Microbiology, Immunology and Genetics, and the Clinical Virology Soroka University Medical Center, Faculty of Health Sciences, Ben Gurion University of the Negev, P.O.B. 653, Beer Sheva 84105, Israel;<email>yonat@bgu.ac.il</email></nlm:aff></affiliation></author><author><name sortKey="Mandelboim, Michal" sort="Mandelboim, Michal" uniqKey="Mandelboim M" first="Michal" last="Mandelboim">Michal Mandelboim</name><affiliation><nlm:aff id="af1-viruses-10-00515">Central Virology Laboratory, Ministry of Health, Chaim Sheba Medical Center, Tel-Hashomer, P.O.B. 5265601, Ramat-Gan 5290002, Israel;<email>Nehemya.Friedman@sheba.health.gov.il</email> (N.F.);<email>hadaralter1@gmail.com</email> (H.A.);<email>hindiyeh@yahoo.com</email> (M.H.);<email>Ella.Mendelson@sheba.health.gov.il</email> (E.M.)</nlm:aff></affiliation><affiliation wicri:level="1"><nlm:aff id="af2-viruses-10-00515">Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978, Israel</nlm:aff><country xml:lang="fr">Israël</country><wicri:regionArea>Department of Epidemiology and Preventive Medicine, School of Public Health, Sackler Faculty of Medicine, Tel-Aviv University, P.O.B. 39040, Tel-Aviv 69978</wicri:regionArea><wicri:noRegion>Tel-Aviv 69978</wicri:noRegion></affiliation></author></analytic><series><title level="j">Viruses</title><idno type="eISSN">1999-4915</idno><imprint><date when="2018">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adolescent</term><term>Adult</term><term>Aged</term><term>Chi-Square Distribution</term><term>Child</term><term>Child, Preschool</term><term>Coronavirus (genetics)</term><term>Coronavirus (isolation & purification)</term><term>Coronavirus Infections (diagnosis)</term><term>Coronavirus Infections (epidemiology)</term><term>Genome, Viral</term><term>Humans</term><term>Infant</term><term>Israel (epidemiology)</term><term>Middle Aged</term><term>Prevalence</term><term>Respiratory Syncytial Viruses (genetics)</term><term>Respiratory Syncytial Viruses (isolation & purification)</term><term>Seasons</term><term>Surveys and Questionnaires</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Adolescent</term><term>Adulte</term><term>Adulte d'âge moyen</term><term>Coronavirus (génétique)</term><term>Coronavirus (isolement et purification)</term><term>Enfant</term><term>Enfant d'âge préscolaire</term><term>Enquêtes et questionnaires</term><term>Génome viral</term><term>Humains</term><term>Infections à coronavirus (diagnostic)</term><term>Infections à coronavirus (épidémiologie)</term><term>Israël (épidémiologie)</term><term>Loi du khi-deux</term><term>Nourrisson</term><term>Prévalence</term><term>Saisons</term><term>Sujet âgé</term><term>Virus respiratoires syncytiaux (génétique)</term><term>Virus respiratoires syncytiaux (isolement et purification)</term></keywords><keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Israel</term></keywords><keywords scheme="MESH" qualifier="diagnosis" xml:lang="en"><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" qualifier="diagnostic" xml:lang="fr"><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term><term>Respiratory Syncytial Viruses</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus</term><term>Virus respiratoires syncytiaux</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term><term>Respiratory Syncytial Viruses</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term><term>Virus respiratoires syncytiaux</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Infections à coronavirus</term><term>Israël</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adolescent</term><term>Adult</term><term>Aged</term><term>Chi-Square Distribution</term><term>Child</term><term>Child, Preschool</term><term>Genome, Viral</term><term>Humans</term><term>Infant</term><term>Middle Aged</term><term>Prevalence</term><term>Seasons</term><term>Surveys and Questionnaires</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adolescent</term><term>Adulte</term><term>Adulte d'âge moyen</term><term>Enfant</term><term>Enfant d'âge préscolaire</term><term>Enquêtes et questionnaires</term><term>Génome viral</term><term>Humains</term><term>Loi du khi-deux</term><term>Nourrisson</term><term>Prévalence</term><term>Saisons</term><term>Sujet âgé</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Israël</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Human coronaviruses (HCoVs) cause mild to severe respiratory diseases. Six types of HCoVs have been discovered, the most recent one termed the Middle East respiratory syndrome coronavirus (MERS-CoV). The aim of this study is to monitor the circulation of HCoV types in the population during 2015–2016 in Israel. HCoVs were detected by real-time PCR analysis in 1910 respiratory samples, collected from influenza-like illness (ILI) patients during the winter sentinel influenza survey across Israel. Moreover, 195 HCoV-positive samples from hospitalized patients were detected during one year at Soroka University Medical Center. While no MERS-CoV infections were detected, 10.36% of patients in the survey were infected with HCoV-OC43 (43.43%), HCoV-NL63 (44.95%), and HCoV-229E (11.62%) viruses. The HCoVs were shown to co-circulate with respiratory syncytial virus (RSV) and to appear prior to influenza virus infections. HCoV clinical symptoms were more severe than those of RSV infections but milder than influenza symptoms. Hospitalized patients had similar HCoV types percentages. However, while it was absent from the public winter survey, 22.6% of the patients were HCoV-HKU1 positives, mainly during the spring-summer period.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Geller, C" uniqKey="Geller C">C. Geller</name></author><author><name sortKey="Varbanov, M" uniqKey="Varbanov M">M. Varbanov</name></author><author><name sortKey="Duval, R E" uniqKey="Duval R">R.E. Duval</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Razuri, H" uniqKey="Razuri H">H. Razuri</name></author><author><name sortKey="Malecki, M" uniqKey="Malecki M">M. Malecki</name></author><author><name sortKey="Tinoco, Y" uniqKey="Tinoco Y">Y. Tinoco</name></author><author><name sortKey="Ortiz, E" uniqKey="Ortiz E">E. Ortiz</name></author><author><name sortKey="Guezala, M C" uniqKey="Guezala M">M.C. 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